CDS

Accession Number TCMCG079C26535
gbkey CDS
Protein Id XP_017436372.1
Location join(29264279..29264533,29264625..29264846,29264957..29265247,29265345..29265542,29265972..29266036,29266126..29266212,29266292..29266412,29266748..29266792,29266872..29267009,29267108..29267180,29267392..29267468,29267567..29267616,29268122..29268179,29268260..29268376,29268839..29268994,29269076..29269180,29269286..29269411,29269496..29269573,29269695..29269790,29269873..29269988,29270075..29270144,29270246..29270299,29270377..29270520,29270689..29270988,29271294..29271716,29271834..29271953)
Gene LOC108342943
GeneID 108342943
Organism Vigna angularis

Protein

Length 1194aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA328963
db_source XM_017580883.1
Definition PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1 [Vigna angularis]

EGGNOG-MAPPER Annotation

COG_category K
Description DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KEGG_TC -
KEGG_Module M00180        [VIEW IN KEGG]
KEGG_Reaction R00435        [VIEW IN KEGG]
R00441        [VIEW IN KEGG]
R00442        [VIEW IN KEGG]
R00443        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE br01611        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K03010        [VIEW IN KEGG]
EC 2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03020        [VIEW IN KEGG]
ko05016        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03020        [VIEW IN KEGG]
map05016        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003899        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005665        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016591        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031050        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034062        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0035195        [VIEW IN EMBL-EBI]
GO:0035196        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043331        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070918        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071359        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097747        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATTTGGAAGAGGAACAAGAGTACGATCAGCAAATGATGGAGGAAGACGACGACGAAGACGATATCACGCAAGAGGATGCGTGGGCTGTTATCTCCGCCTACTTCGAAGAGAAAGGCCTCGTTCGTCAGCAACTCGATTCTTTCGACGAGTTCATCCAAAACACTATGCAGGAAATCGTCGACGAATCCGCCGACATAGAAATTCGACCCGAGTCGCAGCATAATCCCGGTCACCAATCTGATTTCGCCGAGACTATTTACAGAATCAGCTTTGGCCAGATTTACTTGAGTAAGCCCATGATGACGGAGTCTGATGGAGAAACCGCCACGTTGTTTCCCAAGGCTGCTAGGTTAAGGAACCTCACCTATTCAGCTCCTTTGTATGTTGATGTCTCCAAGAGGGTCATCAAGAAGGGGCACGATGGTGAAGAAGTCACCGAGACTCAAGATTTCACTAAAGTTTTCATTGGCAAGGTTCCTATAATGCTTCGGTCTAGTTATTGCACGTTGTACCAAAATTCGGAGAAGGATTTGACTGAACTTGGAGAGTGTCCATATGATCAAGGCGGGTATTTCATTATTAATGGGAGTGAGAAGGTTCTGATTGCTCAGGAGAAGATGAGCACCAACCATGTCTATGTGTTCAAGAAGAGGCAGCCGAACAAGTATGCCTTTGTGGCTGAAGTTCGGTCAATGGCTGAGTCTCAGAACAGACCGCCTAGTACTATGTTTGTGCGCATGCTCTCTCGGACTAGTTCCAAAGGGGGTTCTTCAGGACAATATATACGTGCCACACTTCCTTATATTCGAACTGAAATTCCCATCATTATTGTGTTTCGAGCGTTGGGGTTTGTTGCTGACAAAGATATACTCGAACATATATGCTACGATTTCTCAGATACTCAAATGATGGAATTGCTTCGTCCTTCCCTAGAAGAAGCGTTTGTTATTCAAAATCAACAAGTTGCACTTGACTACATTGGGAAAAGAGGTGCAACTGTTGGTGTAACTAAGGAAAAGAGAATCAAGTATGCTAAGGAGATCCTCCAAAAGGAGATGCTCCCTCATGTGGGTGTTGGAGAATATTGTGAGACCAAGAAAGCATACTATTTTGGATATATCATTCACCGGCTACTTCTGTGTGCACTTGGGCGGAGGGCTGAGGATGATAGGGATCATTACGGCAACAAAAGGCTGGATCTGGCTGGCCCTCTACTTGGGGGCCTTTTTCGAATGCTATTCAGAAAGCTAACGAGAGATGTCAGGGGATATGTACAGAAGTGTGTTGATAATGGGAAAGATGTTAATCTACAATTTGCTATCAAAGCAAAAACCATTACAAGTGGACTTAAATACTCACTAGCTACCGGTAATTGGGGACAAGCAAATGCTGCAGGGACTAGAGCTGGAGTTTCACAGGTGCTGAATCGTTTAACTTTTGCATCAACTTTATCTCACTTGCGAAGACTAAATTCCCCAATAGGACGTGAAGGGAAGTTGGCTAAACCAAGACAGCTGCATAATTCTCAATGGGGAATGATGTGTCCAGCAGAAACACCTGAAGGACAAGCCTGTGGACTTGTGAAGAATCTGGCATTGATGGTCTACATAACAGTTGGTTCAGCAGCATATCCTATTCTGGAGTTTTTGGAAGAATGGGGCACTGAGAATTTCGAGGAAATTTCTCCTGCGGTGATTCCCCAAGCTACTAAGATTTTTGTTAATGGTTGCTGGATGGGTATCCATCGTGACCCTGATATGTTGGTGAGAACTTTGAGGAAGTTGAGACGTCGGGTTGATGTTAATACTGAAGTTGGGGTTGTCAGAGATATCCGTCTTAAAGAATTGCGAATATATACCGATTATGGTCGCTGCAGTCGTCCTTTATTCATTGTGGATAAGCAAAGGCTTCTCATAAAGAAGAGGGATATTCATGCTTTACAACAGAGGGAATCCCCTGAAGAGGGTGGATGGCATGATCTAGTGTCCAAGGGCTTTATAGAATATATTGACACGGAAGAAGAAGAGACCACAATGATTTCCATGACAATTAATGATCTTATTCAAGCTAGGCTCAACCCAGAAGAGGCTTATTCTGATACATACACTCATTGTGAAATCCACCCATCTCTGATTTTGGGTGTGTGTGCTTCTATCATACCATTTCCTGATCACAATCAGTCCCCACGTAATACTTATCAGTCTGCAATGGGAAAACAAGCAATGGGAATATATGTTACCAACTACCAGTTTCGAATGGATACCTTGGCCTATGTTTTATATTATCCACAAAAGCCACTGGTTACTACAAGAGCCATGGAACATCTTCATTTCCGCCAACTCCCTGCTGGAATTAATGCCATTGTGGCCATATCCTGTTATTCTGGTTATAATCAAGAAGATTCTGTCATCATGAACCAATCATCAATAGACCGAGGATTCTTTCGATCTCTTTTTTTCCGATCATATAGAGATGAAGAGAAGAAGATGGGAACCCTAGTCAAAGAAGATTTTGGCCGACCAGACAGAACTAACACCATGGGCATGAGACATGGTTCTTATGATAAGCTGGATGATGATGGTCTTGCACCACCGGGAACAAGAGTATCTGGTGAGGATGTTATTATTGGAAAGACCACCCCAATATCTCAGGAAGAGGCACAGGGACAAGCTTTACGTTACACGAGGCGTGATCACAGCATAAGCTTACGTCACAGTGAAACTGGAATGGTTGATCAAGTTCTGCTGACTACAAATGCTGATGGATTGAGATTTGTGAAAGTAAGAGTGAGATCTGTTCGCATACCACAGATTGGTGACAAATTCAGTAGTAGACATGGTCAGAAGGGGACAGTTGGTATGACTTATACACAAGAGGACATGCCCTGGACTGTGGAAGGCATCACCCCTGATATTATTGTCAATCCACATGCTATTCCATCCCGAATGACAATTGGTCAGCTTATTGAGTGTATCATGGGTAAGGTGGCTGCTCACATGGGAAAGGAAGGAGATGCAACTCCTTTCACAGATGTTACTGTGGATAATATCAGCAAAGCTCTGCACAAATGTGGTTACCAAATGCGTGGTTTTGAAACTATGTACAATGGTCATACAGGGAGACGTCTGAGTGCAATGATTTTCCTTGGTCCTACATATTACCAAAGACTGAAGCATATGGTTGATGACAAGATCCATTCTCGTGGACGTGGTCCTGTGCAGATCCTCACAAGGCAACCTGCTGAGGGACGCTCACGCGATGGAGGTCTCCGATTTGGAGAGATGGAACGAGACTGCATGATTGCTCATGGAGCTGCTCACTTCCTAAAGGAGAGATTGTTTGATCAAAGTGATGCATACAGGGTCCATGTGTGTGAGCGCTGTGGGTTGATAGCCATTGCAAATCTCAAGAAGAATTCTTTCGAGTGCAGGGGGTGCAAGAACAAAACGGACATTGTTCAGGTTTACATCCCTTACGCGTGTAAGTTGCTCTTCCAAGAGTTAATGGCTATGGCCATAGCGCCAAGAATGCTTACGAAGGAGATCAAATCTACAAAAGACCAAAAGAAGAAAGGAGCATGA
Protein:  
MDLEEEQEYDQQMMEEDDDEDDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYRISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKRDIHALQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMISMTINDLIQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLTKEIKSTKDQKKKGA